Bioinformatics Software in the Best of the Web Directory

Bioinformatics Software


    Bioinformatics software featuring robust data management, a sensitive and flexible core BLAST engine, and long-term consistent behavior.

  • AnnHyb

    Tool designed for working with and managing nucleotide sequences in multiple formats. Site provides details on the features, screenshots, and documentation.

  • The ARB Project

    Application for rRNA sequence data collection and rRNA based identification.

  • BiBiServ

    Offering tools and computer applications of use and interest to those working in the bioinformatics field.

  • Biochemfusion: Proteax

    Provides the ability to add post-translational modifications and chemical features to protein sequences, sequence and structural identity checks on protein registrations, and protein exporting and importing in GPMAW format for mass spectrometry analysis.

  • Bioconductor

    Open source software package for genomic data analysis and comprehension.

  • Bioinformatic Sequence Markup Language

    Comprehensive data model made for solving problems related to biological sequences data representation.

  • Bioinformatics Software Tools

    Collection of bioinformatics related applications including databases and tools for sequence alignment and analysis, sequence manipulation, and structural analysis.

  • GeneSpotter

    Software application designed to perform image analyses on biochip data.


    Freely distributed software useful for protein sequence analysis.

  • Interactive Structure based Sequences Alignment Program (STRAP)

    Free program developed to align proteins by sequence and 3D structure. Supports the simultaneous analysis of hundreds of proteins. Screenshots provided.

  • The KoriBlast Platform

    Graphical software environment designed to facilitate the exploration of biological sequence data banks. Provides unified access to local and remote sequence and data repositories.

  • Lynnon Corporation

    Specializes in developing bioinformatics software for education, research and development purposes.

  • MolTalk

    Computational software suite created for structural bioinformatics.

  • Nonlinear

    Specializes in the development of bioinformatics software for proteomics and genomics research. Offers applications for data-mining, analysis, and comparison.

  • pDRAW32

    Free DNA sequence analysis and plotting software for Windows, Mac, and Linux.

  • PhyloSort

    Java tool developed to sort phylogenetic trees. Searches for monophyletic relationship among groups of taxa, filters by tree and family complexity, clusters genes into gene families, and groups OTUs using a taxonomy reference tree.

  • Premier Biosoft International

    Software company provides services and tools useful to computer scientists and molecular biologists.

  • SEquence analysis using WEb Resources (SeWeR)

    Application written in JavaScript.2 operating as an integrated portal to common web-based services in bioinformatics.

  • Unipro UGENE

    Cross-platform genome analysis software suite. Features visual and interactive genome browsing, chromatograms visualization, phylogenetic analysis, protein back translation, and a fast repeat finder.

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