- AnnHyb
- Tool designed for working with and managing nucleotide sequences in multiple formats. Site provides details on the features, screenshots, and documentation.
- The ARB Project
- Application for rRNA sequence data collection and rRNA based identification.
- BiBiServ
- Offering tools and computer applications of use and interest to those working in the bioinformatics field.
- Biochemfusion: Proteax
- Provides the ability to add post-translational modifications and chemical features to protein sequences, sequence and structural identity checks on protein registrations, and protein exporting and importing in GPMAW format for mass spectrometry analysis.
- Bioconductor
- Open source software package for genomic data analysis and comprehension.
- Bioinformatic Sequence Markup Language
- Comprehensive data model made for solving problems related to biological sequences data representation.
- Bioinformatics Software Tools
- Collection of bioinformatics related applications including databases and tools for sequence alignment and analysis, sequence manipulation, and structural analysis.
- GeneSpotter
- Software application designed to perform image analyses on biochip data.
- HMMER
- Freely distributed software useful for protein sequence analysis.
- The KoriBlast Platform
- Graphical software environment designed to facilitate the exploration of biological sequence data banks. Provides unified access to local and remote sequence and data repositories.
- Lynnon Corporation
- Specializes in developing bioinformatics software for education, research and development purposes.
- MAFFT
- Web-based multiple alignment program for amino acid or nucleotide sequences.
- Mauve
- System intended to efficiently construct multiple genome alignments amidst large-scale evolutionary events.
- MolTalk
- Computational software suite created for structural bioinformatics.
- Neno Bio Center
- Provides resources for comparative genomics, genetic visualization, and sequence analysis.
- Nonlinear
- Specializes in the development of bioinformatics software for proteomics and genomics research. Offers applications for data-mining, analysis, and comparison.
- pDRAW32
- Free DNA sequence analysis and plotting software for Windows, Mac, and Linux.
- PhyloSort
- Java tool developed to sort phylogenetic trees. Searches for monophyletic relationship among groups of taxa, filters by tree and family complexity, clusters genes into gene families, and groups OTUs using a taxonomy reference tree.
- Premier Biosoft International
- Software company provides services and tools useful to computer scientists and molecular biologists.
- SEQ Tools
- Software suite created for nucleotide and protein sequence analysis and handling.
- SEquence analysis using WEb Resources (SeWeR)
- Application written in JavaScript1.2 operating as an integrated portal to common web-based services in bioinformatics.
- Sfold
- Software for statistical folding and the rational design of nucleic acids. Includes details on application modules and references.
- Structure Based Alignment Program (STRAP)
- Free computer program that aligns proteins by sequence and 3D-structure. Supports the analysis of hundreds of proteins and integrates amino acid sequence, secondary structure, and residue annotation.
|