BayesBuilder
Program designed for constructing and testing Bayesian networks. Available for free noncommercial uses.
BNet.EngineKit
Developer toolkit enables researchers and engineers to embed belief networks in software applications.
ClassMarker
Application useful for identifying genes that can differentiate among diseases as well as the genes associated with diseases that share common molecular phenomena.
FastMix
Tool developed to generate Gaussian mixture models for large datasets using EM clustering algorithms.
HMMER
Biosequence analysis application that makes use of profile hidden Markov models (profile HMMs).
ILK Software
Offers downloadable software packages for machine learning and Natural Language Processing (NLP).
KEEL
Software designed to assess evolutionary algorithms for data mining problems.
LingPipe
Suite of Java libraries for the linguistic analysis of human language.
MALLET
Integrated suite of Java codes designed for statistical natural language, document classification, clustering, information extraction, and other machine learning applications to text.
Meta-MEME
Software toolkit useful for building and using motif-based hidden Markov models of DNA and proteins.
The Spider
Object oriented environment designed to handle large unsupervised, supervised, or semi-supervised machine learning problems.
Torch
Machine learning library written in simple C++. Supports vector machines and features speech recognition tools.
Weka
Java data mining software offering a collection of machine learning algorithms for data pre-processing, classification, regression, clustering, association rules, visualization, and other data mining tasks.